lineage | Count |
---|---|
33 | |
lineage2.2.1 | 5 |
lineage4.9 | 5 |
La2 | 1 |
La1.8.1 | 1 |
lineage4 | 6 |
lineage4.1.1 | 1 |
lineage6.1.1 | 2 |
lineage3.1.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1.1 | 3 |
lineage4.8 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693254 | Other | None | ERR2693230 | Other | None | SRR5341456 | Other | None | SRR5341470 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None | ERR2693257 | Other | None | ERR2693227 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR8217918 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6511621 | HR-TB | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3445503 | HR-TB | None | ERR3797014 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR3994127 | Other | lineage4.1.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR21675938 | Sensitive | lineage4.8 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176779 | HR-TB | None | SRR4035812 | Sensitive | lineage4.1.2 | None | ERR4814569 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | ERR4815489 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None |
---|