lineage | Count |
---|---|
lineage4.3.4 | 1 |
32 | |
lineage4.9 | 9 |
lineage4 | 28 |
lineage4.6.2.2 | 1 |
lineage2.2.1 | 3 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage3.1.2 | 1 |
lineage2.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | ERR212123 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675555 | HR-TB | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR212034 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323053 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4799025 | Pre-XDR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6866639 | Other | None | ERR4811493 | HR-TB | None | ERR6866022 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | ERR9119669 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1158918 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR14782405 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None |
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