Rv0006 - c.1332C>T
Drug resistance types
17 Sensitive
2 RR-TB
16 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 35 |
| lineage4.9 | 31 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 1 |
| 1 | |
| lineage4.3 | 3 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23174460 | Other | La1.8.1 | None | SRR23174102 | Other | La1.8.1 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR23174461 | Other | La1.8.1 | None | ERR10969233 | Sensitive | lineage4.1.1.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR23174093 | Other | La1.8.1 | None | SRR23174499 | Other | La1.8.1 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR23174272 | Other | La1.8.1 | None | SRR23174083 | Other | La1.8.1 | None | SRR23174089 | Other | La1.8.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR23174108 | Other | La1.8.1 | None | SRR23174110 | Other | La1.8.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR23174105 | Other | La1.8.1 | None | ERR751326 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR23174096 | Other | La1.8.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR23174092 | Other | La1.8.1 | None | SRR23174554 | Other | La1.8.1 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR23174100 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR23174111 | Other | La1.8.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR1063896 | Sensitive | None | SRR21689535 | Sensitive | lineage4.3 | None | ERR6358979 | Other | lineage4.9 | None | SRR23174098 | Other | La1.8.1 | None | SRR23174453 | Other | La1.8.1 | None | SRR23174086 | Other | La1.8.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR23174097 | Other | La1.8.1 | None | SRR23174084 | Other | La1.8.1 | None | SRR23174107 | Other | La1.8.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR23174085 | Other | La1.8.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR23174091 | Other | La1.8.1 | None | SRR23174106 | Other | La1.8.1 | None | SRR23174487 | Other | La1.8.1 | None | SRR23174103 | Other | La1.8.1 | None | SRR23174114 | Other | La1.8.1 | None | SRR23174113 | Other | La1.8.1 | None | SRR23174104 | Other | La1.8.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR23174088 | Other | La1.8.1 | None | ERR4798099 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR22250000 | Sensitive | lineage4.3 | None | ERR11049558 | Sensitive | lineage4.1.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR23174094 | Other | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR23174099 | Other | La1.8.1 | None | SRR23174109 | Other | La1.8.1 | None | SRR23174087 | Other | La1.8.1 | None | ERR13285449 | Sensitive | lineage4.3 | None |
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