Rv3805c - c.1188T>C


Drug resistance types
50 Sensitive 6 RR-TB 41 HR-TB 72 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage7 81
lineage2.1;lineage4.9 7
lineage2.2 1
lineage4.8 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9 12
La3;M.canetti;lineage2.1;lineage4.9 10
La3;lineage4.9 3
lineage4.1.2.1 1
lineage3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9 2
lineage4.4.1.1.1 3
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;lineage4.3.4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 2
lineage2.2.1 2
M.canetti;lineage2.1;lineage4.9 13
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 2
38
lineage1.1.1 1
lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 2
La3;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 2
lineage4.8.1;lineage4.6.4;lineage4.3.4;lineage4.2;lineage4.1.1 1
lineage4.6.4;lineage4.3.4;lineage4.1.1.3;La3 1
spoligotype Counts
spoligotype Count
None 248
Geographic prevalence
Country level data for this variant is available for 50 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR1200617 Other lineage7 et
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR11068585 Sensitive lineage7 None
ERR1971873 Other lineage7 et
ERR1971850 Other lineage7 et
SRR1183049 RR-TB lineage2.2 None
ERR4817735 Other lineage4.8 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
ERR11068109 Sensitive lineage7 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR11043150 Sensitive lineage7 None
ERR756348 Sensitive lineage7 None
ERR4814968 Sensitive lineage7 gb
ERR990545 RR-TB lineage3 None
ERR2704711 Sensitive lineage7 None
ERR756346 Sensitive lineage7 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1200631 Sensitive lineage7 et
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1971863 Other lineage7 et
ERR1971853 Other lineage7 et
SRR6982504 Sensitive lineage4.4.1.1.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR1200613 Sensitive lineage7 et
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2704695_ERR2704711_ERR2704710 Sensitive lineage7 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1971856 Other lineage7 et
ERR161039 HR-TB La3;lineage4.3.4 None
ERR756347 Sensitive lineage7 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1971868 Other lineage7 et
ERR1971869 Other lineage7 et
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1971854 Other lineage7 et
ERR756345 Sensitive lineage7 None
SAMEA4791119 Sensitive lineage7 au
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1971871 Other lineage7 et
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1200636 Other lineage7 et
ERR4816656 Other lineage4.9 None
ERR1971876 Other lineage7 et
ERR11049146 Sensitive lineage7 None
ERR1200602 Sensitive lineage7 et
ERR4819975 Sensitive lineage7 None
ERR2704710 Sensitive lineage7 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1200610 Sensitive lineage7 et
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1200624 Sensitive lineage7 et
ERR400415 Sensitive lineage7 gb
SRR1184381 MDR-TB None
SRR28119805 Other lineage4.9 None
79baca4a-a69a-4980-b9ee-12a7742d919b Other None
e36cc082-9ce5-484d-b7b0-09670e6f3253 HR-TB None
62710dec-9126-404a-b1a2-d257cb793828 HR-TB None
68e4f2ce-e6ec-4697-947f-b12e97b7ba49 Other None
70c04da5-2c60-440c-aa5e-672043796574 HR-TB None
b50f9ef3-fc92-4938-b3fd-a7f534e592fc HR-TB None
eb8da2c7-160f-4368-983f-b78baacae5c8 HR-TB None
c63330fe-c872-4654-9fc2-c704fdf25203 Other None
32cfb0ef-e520-46e3-8899-846b8dc6e08a HR-TB None
57f8d438-5766-47c0-b69f-7eaae89dd9fb Other None
30b8217e-5718-440f-8fe2-22db59dd1182 Other None
d82542a4-d71c-40c9-ad70-1cb3b522f644 Other lineage1.1.1 None
185b3a4c-2446-4baa-a045-836980dccca5 Other None
4d85a0e4-9558-44df-b81b-37888f067dfb Other None
6cfd23b4-2266-42e7-a020-42eb65b73bfb Other None
77be862d-c50d-48c3-9c3c-ea5c987e588f HR-TB None
4b9ad7db-a750-462a-8bf5-ec5928801204 HR-TB None
5a444780-b54d-4e3e-8a68-1bdf680f1e28 Other None
213dd23d-35c8-4c58-8dfb-2d9ede81dc8f Other lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 None
c15e4354-0d1a-489c-b2a4-a86314f060ee Other None
a30f3af2-b0cf-4f6e-9c05-848428fb6b95 Other None
b0f31eb2-1056-4d67-b907-6f687044efa4 HR-TB None
7921e67e-a556-4570-88b1-b2c61415efda Sensitive lineage7 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR233355 Sensitive lineage7 None
ERR756344 Sensitive lineage7 None
ERR1971877 Other lineage7 et
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1200618 Sensitive lineage7 None
ERR1200633 Sensitive lineage7 et
ERR3323719 Sensitive lineage7 None
ERR1971870 Other lineage7 et
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR1200603 Sensitive lineage7 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1971855 Other lineage7 et
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18911237 Other lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4818929 HR-TB lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1200639 Sensitive lineage7 et
ERR7737753 MDR-TB lineage7 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR1971849 Other lineage7 et
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR234681 Sensitive lineage7 None
ERR1971857 Other lineage7 et
ERR233346 Sensitive lineage7 None
ERR1971858 Other lineage7 et
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1971865 Other lineage7 et
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6896212 Sensitive lineage4.4.1.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1971862 Other lineage7 et
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR1971861 Other lineage7 et
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR159959 Other lineage7 None
ERR1200619 Sensitive lineage7 et
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1971860 Other lineage7 et
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR1200612 Sensitive lineage7 et
ERR159958 Sensitive lineage7 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR1971852 Other lineage7 et
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR1200608 Sensitive lineage7 et
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1200635 Sensitive lineage7 et
ERR233354 Sensitive lineage7 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1971874 Other lineage7 et
ERR1971866 Other lineage7 et
ERR1200606 Sensitive lineage7 et
SRR27332343 Sensitive lineage7 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR181435 Sensitive lineage7 dj
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR1200625 Sensitive lineage7 et
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1200634 Sensitive lineage7 et
ERR1971867 Other lineage7 et
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1200604 Sensitive lineage7 et
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1971872 Other lineage7 et
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR1200623 Sensitive lineage7 et
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR11044943 Sensitive lineage7 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR7535086 Other None
ERR4816999 Other None
9d6b11a1-a685-4338-bdf7-e93f965d0c2a Other lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 None
22d66166-2394-4dae-8447-b8d4b6f8ba0a HR-TB lineage4.3.4.2.1 None
50cd1905-4739-4e51-a1e1-0b509d73fffc HR-TB None
6c1db1bb-e2cd-4c4e-95a7-37622c28821f Other None
e2e19eae-57b7-444c-b890-8b00152a7aa2 Other lineage7 None
d3107dbe-d309-4436-a64a-b0fb58bd8bb6 HR-TB None
61cb4b39-70f6-48fa-bef3-fda12d085707 Other None
5c545d0e-4100-46ce-bbe5-cb2fd647e27b Other None
a4ef51cf-09fb-4b4e-a8cd-2f5384d8ac4a MDR-TB None
b22cc88d-171e-4d35-8e44-6fffc20aa85f HR-TB None
81ff8df5-dde2-46d8-84a1-f1ecb3aa3638 HR-TB None
a329c13e-ae92-4e7f-82f1-543555de7ee8 Other None
0e2a2409-bbdf-4cc5-bd48-32b132150f4e Other None
7e499d3e-e73e-4d6f-9a2b-a952c0be0821 HR-TB None
6ce48a17-15ff-4392-8155-09a5b28dd29d Other lineage4.8.1;lineage4.6.4;lineage4.3.4;lineage4.2;lineage4.1.1 None
9a2555cc-c5d0-4c9b-af48-22d28119acc0 Other lineage4.6.4;lineage4.3.4;lineage4.1.1.3;La3 None
9c543114-2400-41d7-a93d-3404bb68be06 Sensitive lineage7 None
ad555b7e-1566-4f32-8665-7414e73aab7f Sensitive lineage7 None
8a1375a0-53e6-4426-ba2f-ab710f67e63c HR-TB None
86251b58-9c36-4408-a023-6f8b9b0e79fc Other None
033fc7a4-cedc-4f53-bf83-85e03cc293f4 Other None
ERR233349 Other lineage7 None
ERR1971859 Other lineage7 et
ERR1200640 Sensitive lineage7 et
ERR2515187 Sensitive lineage4.4.1.1.1 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1971864 Other lineage7 et