lineage | Count |
---|---|
lineage4.1.2.1 | 6 |
lineage4.3.3 | 2 |
68 | |
lineage4.3.4 | 1 |
lineage4 | 11 |
lineage2.2 | 4 |
lineage4.3.2 | 1 |
lineage2.2.1 | 8 |
lineage4.6.2.2 | 4 |
lineage5.2 | 2 |
lineage4.8;lineage4.1 | 1 |
La3 | 1 |
lineage4.9 | 11 |
lineage4.5 | 2 |
lineage4.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.1.1 | 4 |
lineage4.3.4.2.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
La1 | 2 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 138 |
ID | Drug resistance | Lineage | Country iso2 | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR736835 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861304 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR6325445 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4815257 | HR-TB | lineage4.4.1.1 | None | SRR6045455 | Sensitive | lineage4.1.1.1 | gb | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | ERR181887 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR2514692 | Other | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR6045526 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341456 | Other | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR323036 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR2513059 | Sensitive | lineage4.1.1.1 | gb | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514855 | Sensitive | lineage4.1.1.1 | gb | ERR4796577 | MDR-TB | None | ERR2513311 | Sensitive | lineage4.1.1.1 | gb | ERR4798262 | HR-TB | La1 | None |
---|