lineage | Count |
---|---|
31 | |
lineage2 | 1 |
lineage4.3.4 | 1 |
lineage4.9 | 3 |
lineage4 | 6 |
lineage2.2 | 1 |
lineage2.2.1 | 3 |
La1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage4.3.3 | 2 |
lineage2.2.1.1 | 3 |
lineage3.1 | 2 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR2660539 | Other | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675270 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | ERR212123 | Other | None | SRR6045399 | Other | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046046 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR8217918 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | SRR1172951 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172857 | MDR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1175049 | RR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None |
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