Rv0006 - c.1171C>T


Drug resistance types
1 Sensitive 3 RR-TB 36 HR-TB 12 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 85 Other
lineage Counts
lineage Count
lineage3 3
lineage4.9 22
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 4
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
11
lineage4.9;lineage6.3 9
La3;lineage4.9 6
lineage2.1;lineage4.9 9
M.canetti;lineage2.2 2
lineage4.1.2.1 7
lineage2.2.1 6
La1.2.BCG;La1.8.1 1
lineage4.8 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
La3;lineage2.1;lineage4.9 2
lineage4.3.4.2.1 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 9
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2 1
lineage2.1;lineage6.3 1
La3;lineage1.1.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.2 1
lineage4.1;lineage4.8 2
lineage4.5 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
lineage4.1.1.1 1
lineage4.1.3 2
La3 2
lineage5.2 2
lineage4.6.2.2 3
La1.7;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 142
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4800341 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184372 MDR-TB None
ERR9786604 Other None
SRR1167384 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR1180137 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR6789626 Other None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR176643 Other La3;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
SRR6046485 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR212001 HR-TB None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR2179786 Sensitive lineage4.5 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675457 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
SRR18003019 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR2514692 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR4820773 HR-TB lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None