lineage | Count |
---|---|
47 | |
lineage4.6.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage6.3.1 | 1 |
lineage4.1.3 | 2 |
lineage6 | 1 |
lineage4.9 | 3 |
lineage2.2.1 | 5 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage2 | 1 |
lineage4.9;La3 | 1 |
lineage4.1.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage2.2 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | SRR1172857 | MDR-TB | None | ERR736874 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR1173400 | Other | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176793 | Other | lineage4.1.1 | None | SRR26159043 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675572 | Other | None | SRR3675221 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | SRR6046540 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR6045327 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | SRR8217918 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797069 | Other | None |
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