Rv0407 - c.180T>G
Drug resistance types
2 Sensitive
1 RR-TB
62 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| 71 | |
| lineage4.9 | 10 |
| lineage2.2.1 | 5 |
| lineage4.5 | 1 |
| lineage2.2 | 4 |
| lineage2 | 2 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 7 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.7 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| La1.2 | 1 |
| lineage3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR4815604 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675311 | Other | None | SRR3675501 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | None | SRR3675510 | Other | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4817037 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4816585 | Other | lineage2.2 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR4818536 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4819462 | Other | lineage4 | None | ERR4818615 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6046210 | Other | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6045526 | HR-TB | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR6789626 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | SRR8217918 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496517 | Other | None | SRR7585435 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR5336148 | Other | None | ERR4769457 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769521 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4810741 | HR-TB | None | ERR736867 | HR-TB | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR10808805 | Sensitive | None |
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