lineage | Count |
---|---|
42 | |
lineage4.2;La1.7 | 1 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage4;lineage1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.2.1 | 2 |
lineage3 | 1 |
lineage4.1.2.1 | 3 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage2.2.1 | 5 |
lineage4.9 | 2 |
La1.8.1 | 1 |
lineage4 | 1 |
La3 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR6325445 | HR-TB | None | SRR1640750 | HR-TB | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675571 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2515572 | Other | lineage4.3.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | ERR294248 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323041 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | SRR6855768 | Other | lineage4.3.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | DRR188757 | Sensitive | lineage2.2.1 | None | DRR473997 | Other | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR6358837 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR702404 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1169306 | Other | None | ERR9896147 | Sensitive | lineage2.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None |
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