lineage | Count |
---|---|
73 | |
lineage4.1.2.1 | 4 |
lineage3.1 | 2 |
lineage4.1.2 | 1 |
La1 | 1 |
lineage4.9 | 8 |
lineage4 | 9 |
lineage2.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.6 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.1 | 2 |
lineage4.3.3 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 2 |
lineage3;lineage2.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 111 |
ID | Drug resistance | Lineage | Country iso2 | SRR6325444 | HR-TB | None | ERR294248 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR5311099 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR294266 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4811493 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736865 | HR-TB | None | ERR9119669 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9892004 | Sensitive | lineage4.6 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1172310 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13837642 | RR-TB | lineage4.9 | None | ERR1035239 | HR-TB | None | SRR22424774 | MDR-TB | lineage4.3.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR6325445 | HR-TB | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | SRR3675387 | Sensitive | None | SRR3675501 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176740 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4821053 | Other | lineage3 | None | ERR2514692 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341470 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None |
---|