Rv1173 - c.1683T>G
Drug resistance types
11 Sensitive
2 RR-TB
23 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| La3;lineage4.9 | 3 |
| lineage4.9 | 22 |
| lineage4.1;lineage4.8 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 3 |
| M.canetti;lineage2.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| lineage2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| 2 | |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046485 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR5341373 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR990545 | Other | lineage3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR6045555 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None |
|---|
