Rv1854c - c.1032C>G
Drug resistance types
0 Sensitive
1 RR-TB
16 HR-TB
17 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.3 | 26 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 3 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| 1 | |
| M.canetti;lineage1 | 1 |
| lineage2.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR13870403 | Pre-XDR-TB | lineage4.3.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3287747 | MDR-TB | lineage4.3.3 | pe | ERR4178154 | HR-TB | lineage4.3.3 | None | ERR751609 | MDR-TB | lineage4.3.3 | pe | SRR8217918 | HR-TB | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR28393365 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394120 | MDR-TB | lineage4.3.3 | None | ERR3287732 | MDR-TB | lineage4.3.3 | pe | SRR28394183 | MDR-TB | lineage4.3.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR28393364 | XDR-TB | lineage4.3.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2510232 | MDR-TB | lineage4.3.3 | pe | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4812877 | MDR-TB | lineage4.3.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034703 | MDR-TB | lineage4.3.3 | pe | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6865695 | HR-TB | lineage4.3.3 | None | ERR13260682 | MDR-TB | lineage4.3.3 | None | ERR4813642 | MDR-TB | lineage4.3.3 | None | ERR502912 | Other | lineage2.2.1 | None | SRR28393904 | MDR-TB | lineage4.3.3 | None | ERR234659 | Other | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29081653 | MDR-TB | lineage4.3.3 | None | ERR4811913 | MDR-TB | lineage4.3.3 | pe | ERR2516527 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516668 | Pre-XDR-TB | lineage4.3.3 | pe | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR17234904 | MDR-TB | lineage4.3.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR28393767 | MDR-TB | lineage4.3.3 | None | SRR28393969 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR2516628 | Pre-XDR-TB | lineage4.3.3 | None | ERR775358 | MDR-TB | lineage4.3.3 | pe | ERR13260639 | MDR-TB | lineage4.3.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
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