Rv1173 - c.606G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
112 Sensitive
1 RR-TB
11 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9 | 11 |
| lineage4.3.2.1 | 107 |
| La1.7;lineage4.9 | 3 |
| La3;lineage4.9 | 6 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR4034018 | Sensitive | lineage4.3.2.1 | za | SRR4034005 | Sensitive | lineage4.3.2.1 | za | SRR4034019 | Sensitive | lineage4.3.2.1 | za | SRR4034023 | Sensitive | lineage4.3.2.1 | za | SRR4034053 | Sensitive | lineage4.3.2.1 | za | SRR4034054 | Sensitive | lineage4.3.2.1 | za | SRR4034013 | Sensitive | lineage4.3.2.1 | za | SRR4034058 | Sensitive | lineage4.3.2.1 | za | SRR4034303 | Sensitive | lineage4.3.2.1 | za | SRR4034634 | Sensitive | lineage4.3.2.1 | za | SRR4034623 | Sensitive | lineage4.3.2.1 | za | SRR4034547 | Sensitive | lineage4.3.2.1 | za | ERR176778 | HR-TB | lineage4.9 | None | SRR4034064 | Sensitive | lineage4.3.2.1 | None | SRR5341373 | Other | lineage4.9 | None | SRR4034425 | Sensitive | lineage4.3.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR4034480 | Sensitive | lineage4.3.2.1 | None | SRR4034002 | Sensitive | lineage4.3.2.1 | za | SRR4034008 | Sensitive | lineage4.3.2.1 | za | SRR4034049 | Sensitive | lineage4.3.2.1 | za | SRR4034052 | Sensitive | lineage4.3.2.1 | za | SRR4033997 | Sensitive | lineage4.3.2.1 | za | SRR4034024 | Sensitive | lineage4.3.2.1 | za | SRR4034015 | Sensitive | lineage4.3.2.1 | za | SRR4034026 | Sensitive | lineage4.3.2.1 | za | SRR4034051 | Sensitive | lineage4.3.2.1 | za | SRR4034056 | Sensitive | lineage4.3.2.1 | za | SRR4034037 | Sensitive | lineage4.3.2.1 | za | SRR4034004 | Sensitive | lineage4.3.2.1 | za | SRR4034016 | Sensitive | lineage4.3.2.1 | za | SRR4034057 | Sensitive | lineage4.3.2.1 | za | SRR4034035 | Sensitive | lineage4.3.2.1 | za | SRR4034038 | Sensitive | lineage4.3.2.1 | za | SRR4034032 | Sensitive | lineage4.3.2.1 | za | SRR4034148 | Sensitive | lineage4.3.2.1 | za | SRR4034159 | Sensitive | lineage4.3.2.1 | za | SRR4034247 | Sensitive | lineage4.3.2.1 | za | SRR4034270 | Sensitive | lineage4.3.2.1 | za | SRR4034170 | Sensitive | lineage4.3.2.1 | za | SRR4034061 | Sensitive | lineage4.3.2.1 | za | SRR4034358 | Sensitive | lineage4.3.2.1 | za | SRR4034369 | Sensitive | lineage4.3.2.1 | za | SRR4034381 | Sensitive | lineage4.3.2.1 | za | SRR4034447 | Sensitive | lineage4.3.2.1 | za | SRR4034225 | Sensitive | lineage4.3.2.1 | za | SRR4034236 | Sensitive | lineage4.3.2.1 | za | SRR4034392 | Sensitive | lineage4.3.2.1 | za | SRR4034403 | Sensitive | lineage4.3.2.1 | za | SRR4034414 | Sensitive | lineage4.3.2.1 | za | SRR4034030 | Sensitive | lineage4.3.2.1 | za | SRR4034017 | Sensitive | lineage4.3.2.1 | za | SRR4034021 | Sensitive | lineage4.3.2.1 | za | SRR4033999 | Sensitive | lineage4.3.2.1 | za | SRR4034025 | Sensitive | lineage4.3.2.1 | za | SRR4034039 | Sensitive | lineage4.3.2.1 | za | SRR4034020 | Sensitive | lineage4.3.2.1 | za | SRR4034040 | Sensitive | lineage4.3.2.1 | za | SRR4034050 | Sensitive | lineage4.3.2.1 | za | SRR4034059 | Sensitive | lineage4.3.2.1 | za | SRR4034045 | Sensitive | lineage4.3.2.1 | za | SRR4034041 | Sensitive | lineage4.3.2.1 | za | SRR4034146 | Sensitive | lineage4.3.2.1 | za | SRR4034292 | Sensitive | lineage4.3.2.1 | za | SRR4034314 | Sensitive | lineage4.3.2.1 | za | SRR4034458 | Sensitive | lineage4.3.2.1 | za | SRR4034481 | Sensitive | lineage4.3.2.1 | za | SRR4034536 | Sensitive | lineage4.3.2.1 | za | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR4034062 | Sensitive | lineage4.3.2.1 | za | SRR4034048 | Sensitive | lineage4.3.2.1 | za | SRR4034010 | Sensitive | lineage4.3.2.1 | za | SRR4033998 | Sensitive | lineage4.3.2.1 | za | SRR4034612 | Sensitive | lineage4.3.2.1 | za | SRR4034063 | Sensitive | lineage4.3.2.1 | za | SRR4034036 | Sensitive | lineage4.3.2.1 | za | SRR4034047 | Sensitive | lineage4.3.2.1 | za | SRR4034007 | Sensitive | lineage4.3.2.1 | za | SRR4034014 | Sensitive | lineage4.3.2.1 | za | SRR4034028 | Sensitive | lineage4.3.2.1 | za | SRR4034192 | Sensitive | lineage4.3.2.1 | za | SRR4034027 | Sensitive | lineage4.3.2.1 | za | SRR4034347 | Sensitive | lineage4.3.2.1 | za | SRR4034009 | Sensitive | lineage4.3.2.1 | za | SRR4034181 | Sensitive | lineage4.3.2.1 | za | SRR4034043 | Sensitive | lineage4.3.2.1 | za | SRR4034042 | Sensitive | lineage4.3.2.1 | za | SRR4034147 | Sensitive | lineage4.3.2.1 | za | SRR4034590 | Sensitive | lineage4.3.2.1 | za | SRR4034336 | Sensitive | lineage4.3.2.1 | za | SRR4034031 | Sensitive | lineage4.3.2.1 | za | SRR4034492 | Sensitive | lineage4.3.2.1 | za | SRR4034259 | Sensitive | lineage4.3.2.1 | za | SRR4034436 | Sensitive | lineage4.3.2.1 | za | SRR4034214 | Sensitive | lineage4.3.2.1 | za | SRR4034258 | Sensitive | lineage4.3.2.1 | za | SRR4034469 | Sensitive | lineage4.3.2.1 | za | SRR4034203 | Sensitive | lineage4.3.2.1 | za | SRR4034034 | Sensitive | lineage4.3.2.1 | za | SRR4034012 | Sensitive | lineage4.3.2.1 | za | SRR4034046 | Sensitive | lineage4.3.2.1 | za | SRR4034003 | Sensitive | lineage4.3.2.1 | za | ERR181887 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR4034281 | Sensitive | lineage4.3.2.1 | None | SRR4034503 | Sensitive | lineage4.3.2.1 | za | SRR4034601 | Sensitive | lineage4.3.2.1 | za | SRR4034525 | Sensitive | lineage4.3.2.1 | za | SRR4034325 | Sensitive | lineage4.3.2.1 | za | SRR4034001 | Sensitive | lineage4.3.2.1 | None | SRR4034514 | Sensitive | lineage4.3.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR4034006 | Sensitive | lineage4.3.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR4034370 | Sensitive | lineage4.3.2.1 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None |
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