Rv1484 - c.540C>T


Drug resistance types
4 Sensitive 3 RR-TB 30 HR-TB 2 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 80 Other
lineage Counts
lineage Count
lineage4.9 21
lineage4.1.2.1 5
lineage4.2;lineage4.9 3
12
lineage2.1;lineage4.9;lineage6.3 8
lineage2.1 2
lineage4.3.4.2.1 2
lineage4.9;lineage6.3 7
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 1
lineage2.1;lineage4.9 9
M.canetti;lineage4.2;lineage4.9 1
lineage6.3.1 1
La3;lineage2 1
La3;lineage4.9 2
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1 5
La1.7;lineage4.9;lineage7 1
lineage2.2.2;lineage4 1
lineage4.1 1
La3;lineage2.1;lineage6.3 1
lineage3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage4.7 1
La3;lineage4.3.4 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.1.3 2
lineage4 2
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage1.1.1 1
lineage4.9;lineage7 1
lineage4.1.2 1
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
La1.7;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR212001 HR-TB None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675214 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1169194 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR4819877 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4818448 Sensitive lineage3 gb
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9787197 Other None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR4818347 Other lineage4.1.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
SRR1165699 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None