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SRA data
Rv0668
- c.550C>T
Drug resistance types
1 Sensitive
6 RR-TB
16 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage2.2.1
5
lineage4.1.2.1
5
M.canetti;lineage2.1;lineage4.9
5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
3
lineage2.1;lineage4.9
3
lineage4.3.3
2
M.canetti;lineage4.9
2
lineage6.1.1
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
53
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023236
Other
lineage6.1.3
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR108471
HR-TB
lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR176766
HR-TB
lineage2.1;lineage4.9
None
ERR2509673
Other
lineage2.2.1
None
ERR2693228
RR-TB
lineage4.9
None
ERR2693242
RR-TB
lineage2.1;lineage4.9
None
Showing 1 to 10 of 53 entries
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