lineage | Count |
---|---|
17 | |
lineage4.1.2.1.1 | 1 |
lineage4.1.2.1 | 11 |
lineage4.3.3 | 2 |
lineage4 | 1 |
lineage6.1.1 | 2 |
lineage4.3.2 | 1 |
lineage4.9 | 9 |
lineage2.2.1 | 6 |
lineage4.1 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | SRR8217918 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR3445504 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR13837566 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR26112369 | Other | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1640750 | HR-TB | None | SRR26112586 | Other | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR278594 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341456 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4821053 | Other | lineage3 | None | ERR2509673 | Other | lineage2.2.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None |
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