lineage | Count |
---|---|
lineage4.9 | 10 |
lineage2.2 | 4 |
lineage4.5 | 1 |
lineage2 | 2 |
61 | |
lineage4.9;La3 | 1 |
lineage1.1.1 | 3 |
lineage4.3 | 1 |
lineage4 | 8 |
lineage4.8 | 2 |
lineage2.2.1 | 6 |
lineage1.1.1.1 | 1 |
La1.8.1 | 1 |
lineage4.1.2 | 1 |
lineage5.2 | 2 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 5 |
lineage4.1.3 | 2 |
lineage1.1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
La3 | 1 |
lineage6.3.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | SRR19295647 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR25827682 | Other | None | SRR26159043 | Other | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675221 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR5709982 | Sensitive | lineage1.1.1 | th | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675311 | Other | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675510 | Other | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5073726 | Other | lineage1.1.1.1 | vn | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341313 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR751769 | HR-TB | lineage1.1.1 | th | SRR6046540 | HR-TB | None | ERR2679270 | HR-TB | lineage4.1.2 | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR8217918 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283036 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR702404 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1169249 | Other | La3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR14066533 | Sensitive | lineage1.1.1 | None |
---|