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SRA data
Rv2535c
- c.555T>C
Drug resistance types
3 Sensitive
1 RR-TB
12 HR-TB
2 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
15 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
3
lineage4.9;lineage7
3
3
lineage2.1;lineage4.9
2
La3;lineage4.9
2
M.canetti;lineage2.2
2
lineage4.3.4.2.1
1
La1.7.X-unk4;lineage4.9
1
lineage2.1;lineage4.9;lineage7
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
35
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR161034
HR-TB
lineage4.3.4.2.1
None
ERR212001
HR-TB
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR2514692
Other
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
ERR2693245
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693254
Other
La1.6;La3;lineage4.9
None
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