lineage | Count |
---|---|
68 | |
lineage2.2 | 3 |
lineage2.2.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4 | 8 |
lineage4.1.1 | 1 |
lineage2.2.1 | 3 |
lineage1.1.2 | 1 |
lineage4.9 | 5 |
lineage4.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046492 | Other | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6982281 | Sensitive | lineage4.4.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | ERR1034652 | Other | None | ERR323053 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797048 | HR-TB | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3994095 | HR-TB | lineage4.1.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR9786843 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8975142 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | SRR10808805 | Sensitive | None | SRR1173629 | Other | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180448 | Sensitive | lineage1.1.2 | None | SRR12416824 | HR-TB | None | ERR181744 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675456 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | ERR551075 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | SRR5341302 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR2514692 | Other | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6046362 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None |
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