TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.103_105delTTAinsCG
Drug resistance types
16 Sensitive
6 RR-TB
16 HR-TB
20 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
27
M.canetti;lineage2.1;lineage4.9
6
lineage2.1;lineage4.9;lineage6.3
3
lineage2.2.1
3
La1.7;lineage4.9
2
La3;lineage4.9
2
lineage4.9;lineage9
2
lineage4
2
La3;lineage2.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
Showing 1 to 10 of 41 entries
Previous
1
2
3
4
5
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
82
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR161039
HR-TB
La3;lineage4.3.4
None
ERR176560
HR-TB
La1.7;lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2027263
Other
lineage4
None
ERR2513283
Sensitive
lineage5.1.4
None
ERR2693239
RR-TB
M.canetti;lineage2.1;lineage4
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
Showing 1 to 10 of 82 entries
Previous
1
2
3
4
5
…
9
Next