Rv3596c - c.103_105delTTAinsCG


Drug resistance types
36 Sensitive 14 RR-TB 45 HR-TB 50 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
lineage4.9 58
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 7
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage3 5
lineage4.9;lineage9 3
lineage4.5 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.3;lineage4.9 3
lineage4.9;lineage6.3 5
lineage2.2.1.2;lineage7 1
La1.7;M.canetti;lineage4.9 1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9 8
lineage4.3.3 1
lineage4 4
lineage2.2.1 7
lineage2.1;lineage4.9 4
lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1;lineage4 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage5.1.4 1
lineage4.1.2.1 2
11
La3;lineage4.9 3
lineage4.1.1.3;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage6.3.1 1
lineage6.1.1 2
lineage2.2.2 1
lineage2.1 1
lineage4.8 1
lineage4.1.3 2
lineage3.1.2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9 2
La2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.2;lineage4.9 3
lineage4.1;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7.1 1
La1;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.1.1.1 1
lineage2.1;lineage6.3 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.5 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.3.4.2.1 1
La3;lineage4.3.4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2 1
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage3;lineage4.9 1
lineage4.6.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.2 1
M.canetti;lineage2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 206
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769439 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046897 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6044819 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311094 HR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2513283 Sensitive lineage5.1.4 None
ERR9786682 Other lineage4.1.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR369157 Sensitive lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787014 RR-TB lineage6.1.1 None
ERR4816964 HR-TB lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675473 Sensitive lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR17832802 HR-TB lineage3 None
SRR10315751 MDR-TB lineage4.8 None
SRR3675461 RR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675580 Sensitive lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR6358951 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1238558 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR9117709 Other None
SRR3675236 Other None
ERR4769497 Other La1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4798504 RR-TB lineage3 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4596902 MDR-TB lineage3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR3799304 RR-TB lineage6.1.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR400326 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046210 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675541 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6044876 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675494 RR-TB lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR7496509 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR25827682 Other None
SRR28119805 Other lineage4.9 None
SRR12708416 Sensitive None
ERR4818710 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046492 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4799547 HR-TB lineage2.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None