Rv0701 - c.-64_-62delCTCinsTG
Drug resistance types
3 Sensitive
7 RR-TB
11 HR-TB
17 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.9 | 6 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9 | 17 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.5 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.9 | 2 |
| 1 | |
| lineage3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3797085 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675461 | RR-TB | lineage4.9 | None |
|---|
