Rv1484 - c.-88T>A
Drug resistance types
24 Sensitive
3 RR-TB
57 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| 80 | |
| lineage4.3.3 | 2 |
| lineage4 | 31 |
| lineage2.2.1 | 8 |
| lineage4.9 | 5 |
| lineage3.1 | 1 |
| lineage2 | 2 |
| lineage4.5 | 1 |
| La1.8.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.4.1.1.1 | 2 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 4 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 163 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173363 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173484 | Other | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196768 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR15368973 | Other | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR23862123 | Other | lineage4 | None | SRR25827682 | Other | None | SRR21677894 | Other | lineage4.1.1.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341453 | Sensitive | None | ERR4818615 | Other | None | SRR5341461 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2515593 | Sensitive | lineage4.4.1.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6044790 | HR-TB | None | ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046540 | HR-TB | None | ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | SRR6896606 | Sensitive | lineage4.4.1.1.1 | None | ERR502532 | HR-TB | None | SRR7535086 | Other | None | SRR8217918 | HR-TB | None | SRR7496509 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496517 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323043 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None | DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3283027 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283036 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797069 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4407463 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR6866639 | Other | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6866022 | Other | None | ERR9787197 | Other | None | ERR702406 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9117709 | HR-TB | None |
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