Rv1819c - c.-220G>C


Drug resistance types
8 Sensitive 12 RR-TB 31 HR-TB 85 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 60 Other
lineage Counts
lineage Count
La3;M.canetti;lineage3.1 1
lineage4.6.2.2 3
M.canetti;lineage2.1;lineage3 1
lineage4.1.1.1 2
lineage4.1.2.1 14
La3;M.canetti;lineage2.1;lineage4.9 11
lineage4.9;lineage6.3 3
12
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 23
lineage3 5
lineage1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.9 17
lineage2.2.1 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage4.6.1.1 1
lineage2.1;lineage4.9 6
lineage4.4.1.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
La3;lineage4.8 1
lineage6.3.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.8 2
La1.6;La3;lineage4.9 1
lineage4.1.3 2
M.canetti;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2 1
lineage4.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 1
lineage1.1.2;lineage4 1
La1.2.BCG 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
lineage4.7 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1 2
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.3.4.2.1 1
La3;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR6789626 Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4818099 Sensitive lineage4.1.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4819856 Sensitive lineage4.1.2.1 gb
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818547 Sensitive lineage4.1.2.1 gb
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR21690362 Other lineage1.1.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816830 Sensitive lineage4.1.2.1 gb
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR987722 MDR-TB None
ERR4816999 Other None
ERR4816921 Sensitive lineage4.1.2.1 gb
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR9787139 Other lineage6.3.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816536 Sensitive lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4818347 Other lineage4.1.2 None
ERR4822135 Sensitive lineage4.1.2.1 gb
SRR10808730 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR9786604 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR28119777 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
ERR4814424 Sensitive lineage4.1.2.1 gb
ERR4798493 MDR-TB lineage2.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3283032 Other lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None