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SRA data
Rv3794
- c.1932C>T
Drug resistance types
10 Sensitive
1 RR-TB
18 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
22
lineage4.9
10
La3;lineage4.9
3
M.canetti;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage4.2;lineage4.8.1;lineage4.9
2
lineage4.2;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
53
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130102
MDR-TB
lineage2.2.1
None
DRR473790
Other
lineage2.2.1
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11252612
Other
La3;lineage4.9
None
ERR13193759
Other
lineage2.2.1
None
ERR13258496
MDR-TB
lineage2.2.1
None
ERR13292223
Sensitive
lineage2.2.1
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
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