Rv3794 - c.1932C>T
Drug resistance types
10 Sensitive
1 RR-TB
18 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 10 |
| La3;lineage4.9 | 3 |
| lineage2.2.1 | 22 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8217918 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR13193759 | Other | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR13292223 | Sensitive | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR21276940 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR25515307 | Sensitive | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR10305820 | Sensitive | lineage2.2.1 | None | SRR1169249 | Other | lineage4.9 | None | SRR25628578 | Other | lineage2.2.1 | None | SRR10305804 | Other | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR13258496 | MDR-TB | lineage2.2.1 | None | DRR473790 | Other | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR25628567 | Other | lineage2.2.1 | None | SRR25515506 | Other | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1723532 | HR-TB | lineage2.2.1 | cn | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR4819694 | Sensitive | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | DRR130102 | MDR-TB | lineage2.2.1 | None | SRR21662812 | Sensitive | lineage2.2.1 | None | SRR25534394 | Other | lineage2.2.1 | None | SRR21031723 | Sensitive | lineage2.2.1 | None | SRR29053531 | Sensitive | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR25515729 | Sensitive | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR18910998 | Sensitive | lineage2.2.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR10305630 | HR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR20969961 | Sensitive | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
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