Rv1484 - c.-31T>C
Drug resistance types
3 Sensitive
1 RR-TB
17 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 11 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| 2 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR8217918 | HR-TB | lineage4.9 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR1063849 | HR-TB | lineage4.9 | None |
| ERR4816656 | Other | lineage4.9 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| ERR234659 | Other | None | |
| ERR4819241 | Other | lineage4.9 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| SRR5535933 | Other | lineage4.9 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR1063862 | HR-TB | lineage4.9 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR26159048 | HR-TB | lineage4.9 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| ERR11465597 | Sensitive | lineage4.1.2.1 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR1172728 | RR-TB | La3 | None |
| ERR176751 | Other | lineage4.9 | None |
| SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR9786843 | Other | None | |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
