Rv0407 - c.66A>G


Drug resistance types
64 Sensitive 6 RR-TB 33 HR-TB 11 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
lineage4.9 16
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.3.2 86
16
lineage2.1;lineage4.9 14
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3 9
lineage4.9;lineage7 1
lineage4.1.2 1
lineage4.9;lineage6.3 3
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 2
lineage1.1.2;lineage1.1.3.2 1
La3;lineage2 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage2.2.1 7
lineage2.1 5
La3;lineage1.1.2 1
lineage4.1.2.1 5
lineage3.1.1 1
La3 2
lineage3.1 1
La1.2.BCG 1
lineage4.3.4.2.1 1
La1.7;lineage4.9 2
lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.3 2
lineage4.7 1
lineage2.1;lineage6.3 2
lineage4 1
lineage3 1
lineage4.1.1.1 1
lineage4.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.8 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 211
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8217918 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8975015 Sensitive lineage1.1.3.2 None
ERR7821103 HR-TB lineage1.1.3.2 None
ERR9117709 Other None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR190382 Sensitive lineage1.1.3.2 mw
SAMEA2535315 Other lineage1.1.3.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR5535821 Sensitive lineage1.1.3.2 None
ERR3797070 Other lineage4.9 None
ERR11252669 Sensitive lineage1.1.3.2 None
ERR11252419 Sensitive lineage1.1.3.2 None
ERR11252508 Sensitive lineage1.1.3.2 None
ERR11252676 Sensitive lineage1.1.3.2 None
ERR11252574 Sensitive lineage1.1.3.2 None
SRR1172857 Other None
ERR9787197 Other None
ERR11252575 Sensitive lineage1.1.3.2 None
ERR4817060 Other None
ERR234659 Other None
ERR11811415 Other lineage1.1.3.2 None
ERR11811449 Sensitive lineage1.1.3.2 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465270 Sensitive lineage1.1.3.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786604 Other None
ERR4818347 Other lineage4.1.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR18913789 Sensitive lineage1.1.3.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR13286105 MDR-TB lineage1.1.3.2 None
ERR11811457 Other lineage1.1.3.2 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR2660508 Sensitive lineage1.1.3.2 None
ERR161087 Sensitive lineage1.1.2;lineage1.1.3.2 mw
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR2660446 Sensitive lineage1.1.3.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR6207288 HR-TB lineage1.1.3.2 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9806803 RR-TB lineage1.1.3.2 None
ERR553334 Other lineage1.1.3.2 None
SRR16115876 Sensitive lineage1.1.3.2 None
ERR2660524 HR-TB lineage1.1.3.2 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR7821158 Sensitive lineage1.1.3.2 None
SRR18715435 Sensitive lineage4.1.2.1 None
SRR6789626 Other None
ERR895346 Other lineage1.1.3.2 None
SRR1196474 Other lineage3.1.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11465789 Sensitive lineage1.1.3.2 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR11252545 Sensitive lineage1.1.3.2 None
ERR11488587 RR-TB lineage1.1.3.2 None
SRR10315577 Sensitive lineage1.1.3.2 None
SRR7535086 Other None
ERR11252719 Sensitive lineage1.1.3.2 None
SRR1172728 RR-TB La3 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR11488821 MDR-TB lineage1.1.3.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR11252722 Sensitive lineage1.1.3.2 None
ERR11252660 Sensitive lineage1.1.3.2 None
ERR11252425 Sensitive lineage1.1.3.2 None
ERR11252539 Sensitive lineage1.1.3.2 None
ERR11252410 Sensitive lineage1.1.3.2 None
SRR6789621 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR11252629 Sensitive lineage1.1.3.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR11775546 Sensitive lineage1.1.3.2 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR10748168 Other lineage1.1.3.2 None
ERR7821178 Sensitive lineage1.1.3.2 None
ERR7821231 HR-TB lineage1.1.3.2 None
ERR2199787 Sensitive lineage1.1.3.2 sz
SRR6044790 Other lineage2.1;lineage4.9 None
SRR12882486 Sensitive lineage1.1.3.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR10969195 Sensitive lineage1.1.3.2 None
SRR1184312 Other lineage2.2.1 None
ERR2660434 Sensitive lineage1.1.3.2 None
ERR2660447 Sensitive lineage1.1.3.2 None
ERR2027263 Other lineage4 None
ERR11466400 Sensitive lineage1.1.3.2 None
ERR4797588 MDR-TB lineage3 None
ERR4820854 Other lineage4.1.2.1 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
ERR6929523 RR-TB lineage1.1.3.2 None
ERR3804169 HR-TB lineage4.1.3 None
ERR10610128 RR-TB lineage1.1.3.2 None
ERR11488475 MDR-TB lineage1.1.3.2 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1172234 Other lineage4.9 None
ERR8975433 Sensitive lineage1.1.3.2 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR11488476 MDR-TB lineage1.1.3.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR7902615 Sensitive lineage1.1.3.2 None
ERR11252601 Sensitive lineage1.1.3.2 None
SRR12882574 Sensitive lineage1.1.3.2 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR11252483 Sensitive lineage1.1.3.2 None
ERR11252721 Sensitive lineage1.1.3.2 None
ERR11252681 Sensitive lineage1.1.3.2 None
ERR11252441 Other lineage1.1.3.2 None
SRR1184381 MDR-TB None
ERR11811395 Sensitive lineage1.1.3.2 None
ERR11811399 HR-TB lineage1.1.3.2 None
ERR11811452 Sensitive lineage1.1.3.2 None
ERR11811407 Sensitive lineage1.1.3.2 None
ERR11811437 Sensitive lineage1.1.3.2 None
ERR4814352 Other lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR11489026 MDR-TB lineage1.1.3.2 None
ERR2660476 Sensitive lineage1.1.3.2 None
ERR4819781 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR12142423 Sensitive lineage2.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR13292453 Sensitive lineage1.1.3.2 None
SRR1196566 Other lineage4.9 None
ERR11252440 HR-TB lineage1.1.3.2 None
ERR11465866 Sensitive lineage1.1.3.2 None
ERR11489065 MDR-TB lineage1.1.3.2 None
ERR212073 Sensitive lineage1.1.3.2 mw
SRR1173778 Other lineage4.9 None
ERR11252501 Sensitive lineage1.1.3.2 None
ERR11811441 HR-TB lineage1.1.3.2 None
SRR3675275 Other lineage4.9 None
ERR2660540 Sensitive lineage1.1.3.2 None
ERR4817893 Other La3;lineage4.8 None
ERR11811410 Sensitive lineage1.1.3.2 None
ERR387051 Other lineage4.9 None
ERR11252661 Sensitive lineage1.1.3.2 None
ERR245782 Sensitive lineage1.1.3.2 mw
SRR1710057 Other lineage2.1 None
ERR161088 Sensitive lineage1.1.3.2 mw
SRR12882242 Sensitive lineage1.1.3.2 None
SRR1173218 Other lineage4.3.3 None
ERR7821186 Sensitive lineage1.1.3.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR11488910 MDR-TB lineage1.1.3.2 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR2660468 Sensitive lineage1.1.3.2 None
SRR1196546 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2200009 Sensitive lineage1.1.3.2 sz
ERR2660449 Sensitive lineage1.1.3.2 None