| lineage | Count |
|---|---|
| lineage4.8 | 7 |
| lineage3.1.2 | 19 |
| lineage4.9 | 11 |
| lineage4.9;lineage7 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| spoligotype | Count |
|---|---|
| None | 52 |
| ID | Drug resistance | Lineage | Country iso2 | SRR26112434 | Sensitive | lineage4.8 | None | SRR15014759 | MDR-TB | lineage3.1.2 | None | SRR29772773 | Pre-XDR-TB | lineage3.1.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR29772764 | MDR-TB | lineage3.1.2 | None | SRR29772611 | MDR-TB | lineage3.1.2 | None | SRR15014736 | MDR-TB | lineage3.1.2 | None | ERR4812331 | Other | lineage4.8 | pe | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | SRR15014648 | MDR-TB | lineage3.1.2 | None | SRR15014702 | MDR-TB | lineage3.1.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR15014760 | Pre-XDR-TB | lineage3.1.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR15014644 | MDR-TB | lineage3.1.2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR15014612 | Pre-XDR-TB | lineage3.1.2 | None | SRR29126735 | Sensitive | lineage4.8 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR15014775 | MDR-TB | lineage3.1.2 | None | SRR29772642 | MDR-TB | lineage3.1.2 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR15014680 | MDR-TB | lineage3.1.2 | None | ERR4829425 | Sensitive | lineage4.8 | it | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR13291401 | Sensitive | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR15014690 | MDR-TB | lineage3.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR21677634 | Sensitive | lineage4.8 | None | SRR15014752 | MDR-TB | lineage3.1.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR15014767 | MDR-TB | lineage3.1.2 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6046593 | Other | lineage4.9 | None | SRR29772772 | Pre-XDR-TB | lineage3.1.2 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR28860079 | Sensitive | lineage4.8 | None | SRR15014610 | MDR-TB | lineage3.1.2 | None | SRR15014604 | MDR-TB | lineage3.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
|---|