TB-Profiler
Home
Upload
SRA data
Rv0006
- c.2199A>G
Drug resistance types
7 Sensitive
1 RR-TB
12 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage3.1.2.1
11
lineage4.9
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage4.3.4.2
2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
M.canetti;lineage2.1;lineage6.3
1
lineage2.1;lineage2.2;lineage6.3
1
lineage4.9;lineage6.1.3
1
M.canetti;lineage4.2;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
Showing 1 to 10 of 16 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
32
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR13292161
Sensitive
lineage4.3.4.2
None
ERR13292344
HR-TB
lineage3.1.2.1
None
ERR13292371
HR-TB
lineage3.1.2.1
None
ERR3445503
Other
La1.7.1;La1.7.X-unk4
None
ERR3445504
Other
lineage4.9;lineage6.1.3
None
ERR4769521
RR-TB
lineage4.9
None
ERR4797488
Sensitive
lineage3.1.2.1
in
ERR6866807
Other
lineage4.9
None
Showing 1 to 10 of 32 entries
Previous
1
2
3
4
Next