Rv0006 - c.2199A>G
Drug resistance types
7 Sensitive
1 RR-TB
12 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 11 |
| lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.9 | 4 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.3.4.2 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29230938 | Sensitive | lineage3.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4797488 | Sensitive | lineage3.1.2.1 | in | SRR16115077 | HR-TB | lineage3.1.2.1 | None | SRR18909913 | Other | lineage4.3.4.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR29230692 | Sensitive | lineage3.1.2.1 | None | SRR24827315 | HR-TB | lineage3.1.2.1 | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR13292161 | Sensitive | lineage4.3.4.2 | None | ERR13292344 | HR-TB | lineage3.1.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR13292371 | HR-TB | lineage3.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR28045823 | Sensitive | lineage3.1.2.1 | None | SRR18911918 | HR-TB | lineage3.1.2.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29231233 | Sensitive | lineage3.1.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR18911869 | HR-TB | lineage3.1.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
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