Rv0682 - c.-336T>C


Drug resistance types
3 Sensitive 1 RR-TB 36 HR-TB 19 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.9 13
M.canetti;lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage6.3 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage2.1;lineage4.9 6
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;M.canetti;lineage3.1 1
3
La3;M.canetti;lineage2.1;lineage4.9 8
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.2.2;lineage6.2 2
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 1
lineage2.2.1 1
La1.7;lineage4.9 3
lineage3.1.2.2 1
lineage3.1;lineage4.1.2.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7 2
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 3
lineage4.1.1.1 1
lineage4.9;lineage6.3 2
lineage2.1 1
La3 1
M.canetti;lineage2.1 1
lineage4.5 1
La3;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 89
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR176751 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR234659 Other None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR2514067 Sensitive lineage3.1;lineage4.1.2.1 gb
ERR1063846 HR-TB lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
SRR8217918 HR-TB lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675385 Other La1.7;lineage4.9 None
SRR18213713 HR-TB None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR987722 MDR-TB None
ERR123931 HR-TB lineage4.5 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR7069755 Sensitive lineage3.1;lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None