lineage | Count |
---|---|
lineage6.3;lineage2.2.1 | 1 |
57 | |
lineage2 | 3 |
lineage4.8 | 1 |
lineage4.9 | 6 |
lineage2.2.1 | 3 |
lineage2.1 | 1 |
lineage4.1.1 | 2 |
lineage4.8;La3 | 1 |
lineage4 | 23 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage1.1.2 | 1 |
lineage6.3.1 | 1 |
lineage4.3.3 | 2 |
lineage3.1 | 2 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081258 | Other | lineage4.8 | None | SRR26159043 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR19304036 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR181744 | HR-TB | None | ERR212123 | Other | None | SRR3742665 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675574 | HR-TB | None | ERR234659 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341302 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045327 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | SRR8217918 | HR-TB | None | SRR6045399 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4798431 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811142 | MDR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358979 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR702406 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | SRR10808805 | Sensitive | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None |
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