Rv0565c - c.357T>C
Drug resistance types
40 Sensitive
1 RR-TB
10 HR-TB
26 MDR-TB
5 Pre-XDR-TB
3 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2.1 | 1 |
| lineage3 | 65 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 3 | |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage3 | 4 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818003 | Other | lineage1.2.1.2.1 | gb | SRR21690376 | Sensitive | lineage3 | None | ERR11044451 | Sensitive | lineage3 | None | SRR1163051 | MDR-TB | lineage3 | None | ERR11044342 | Sensitive | lineage3 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4820380 | Sensitive | lineage3 | gb | SRR1146416 | MDR-TB | lineage3 | None | ERR11083087 | MDR-TB | lineage3 | None | SRR6045986 | Other | lineage3 | None | ERR11050977 | Sensitive | lineage3 | None | ERR11067992 | Sensitive | lineage3 | None | ERR5979442 | MDR-TB | lineage3 | None | SRR2101166 | Sensitive | lineage3 | None | SRR1144789 | MDR-TB | lineage3 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675236 | Other | None | ERR2510465 | MDR-TB | lineage3 | pk | ERR2516617 | MDR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR190402 | Sensitive | lineage3 | mw | SRR1163146 | MDR-TB | lineage3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11049731 | Sensitive | lineage3 | None | ERR11043680 | MDR-TB | lineage3 | None | ERR4800407 | Other | lineage3 | in | ERR2446348 | Sensitive | lineage3 | nl | ERR4818374 | Sensitive | lineage3 | None | SRR19267910 | Other | lineage3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827481 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR21690986 | Sensitive | lineage3 | None | SAMN02599063 | Sensitive | lineage3 | in | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4596929 | MDR-TB | lineage3;lineage4.2.2.2 | None | SRR21733042 | Sensitive | lineage3 | None | ERR3470676 | Sensitive | lineage3 | None | ERR11081823 | MDR-TB | lineage3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR21690729 | Sensitive | lineage3 | None | SRR1172931 | Sensitive | lineage3 | None | ERR11044460 | Sensitive | lineage3 | None | SRR1173171 | Sensitive | lineage3 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR4829937 | Pre-XDR-TB | lineage3 | pk | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR11050067 | Sensitive | lineage3 | None | SRR1173812 | Sensitive | lineage3 | None | ERR2516402 | MDR-TB | lineage3 | nl | ERR3275681 | Sensitive | lineage3 | nl | ERR11080937 | MDR-TB | lineage3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR25827681 | Other | lineage3 | None | ERR11080892 | MDR-TB | lineage3 | None | SRR25827487 | XDR-TB | lineage2.2.1;lineage3 | None | ERR3275871 | Sensitive | lineage3 | nl | ERR3276105 | Sensitive | lineage3 | nl | SRR25827440 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR4596928 | Sensitive | lineage3 | None | SRR25827734 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR11082002 | Sensitive | lineage3 | None | SAMN02414870 | MDR-TB | lineage3 | se | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02628488 | Sensitive | lineage3 | ir | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3275838 | Sensitive | lineage3 | nl | SRR1175032 | Sensitive | lineage3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5979445 | Sensitive | lineage3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4796860 | Sensitive | lineage3 | in | ERR330728 | Sensitive | lineage3 | None | SRR25827852 | XDR-TB | lineage3 | None | SRR21690835 | Sensitive | lineage3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2851365 | MDR-TB | lineage3 | lb | ERR10465775 | Sensitive | lineage3 | None | ERR5979448 | MDR-TB | lineage3 | None | SRR3105768 | Pre-XDR-TB | lineage3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4596927 | Sensitive | lineage3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR21691082 | Sensitive | lineage3 | None | ERR4821072 | Sensitive | lineage3 | gb | SRR27450019 | Sensitive | lineage3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4819312 | Sensitive | lineage3 | None | SRR21732611 | Sensitive | lineage3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
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