Rv0565c - c.357T>C

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
50 Sensitive 1 RR-TB 14 HR-TB 30 MDR-TB 6 Pre-XDR-TB 3 XDR-TB 14 Other
lineage Counts
lineage Count
9
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage3 86
lineage2.2.1;lineage3 4
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1 2
lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage6.3 1
lineage2.1 1
lineage4.1.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3;lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 118
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR29231113 Pre-XDR-TB lineage3 None
SRR25827487 XDR-TB lineage2.2.1;lineage3 None
SRR25827440 XDR-TB lineage2.2.1;lineage3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
SRR6045986 Other lineage3 None
SRR8217918 HR-TB lineage4.9 None
SRR21733042 Sensitive lineage3 None
ERR13249499 Sensitive lineage3 None
ERR11050067 Sensitive lineage3 None
ERR11067992 Sensitive lineage3 None
ERR13284336 MDR-TB lineage3 None
ERR2510465 MDR-TB lineage3 pk
ERR4796860 Sensitive lineage3 in
SRR25827481 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR9786843 Other None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR11044460 Sensitive lineage3 None
ERR330728 Sensitive lineage3 None
SRR2101166 Sensitive lineage3 None
ERR2851365 MDR-TB lineage3 lb
ERR4818003 Sensitive lineage1.2.1.2.1 gb
ERR4820380 Sensitive lineage3 gb
ERR11044342 Sensitive lineage3 None
ERR190402 Sensitive lineage3 mw
SRR21690835 Sensitive lineage3 None
SRR1173171 Sensitive lineage3 None
ERR2516617 MDR-TB lineage3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR10465775 Sensitive lineage3 None
ERR5979448 MDR-TB lineage3 None
SRR6046815 Other lineage3 None
ERR11080937 MDR-TB lineage3 None
SRR1163051 MDR-TB lineage3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR11080892 MDR-TB lineage3 None
ERR4596927 Sensitive lineage3 None
SRR16370668 Sensitive lineage3 None
SRR19267910 Sensitive lineage3 None
ERR4818374 Sensitive lineage3 None
SRR29053217 Sensitive lineage3 None
SRR27450019 Sensitive lineage3 None
ERR11049731 Sensitive lineage3 None
ERR3275681 Sensitive lineage3 nl
ERR3276105 Sensitive lineage3 nl
ERR3275838 Sensitive lineage3 nl
ERR13290321 MDR-TB lineage3 None
SRR21690986 Sensitive lineage3 None
ERR13249509 Other lineage3 None
SRR21732611 Sensitive lineage3 None
ERR4596928 Sensitive lineage3 None
SRR21690376 Sensitive lineage3 None
ERR11044451 Sensitive lineage3 None
ERR13290320 MDR-TB lineage3 None
ERR5979445 Sensitive lineage3 None
ERR4811142 RR-TB None
ERR5979454 Pre-XDR-TB lineage3 None
ERR4811075 Other None
ERR4811311 Other None
ERR13249511 Sensitive lineage3 None
SRR12142341 HR-TB lineage2.2.1 None
SRR12416824 HR-TB None
ERR13290319 MDR-TB lineage3 None
SRR28868393 Sensitive lineage3 None
ERR11083087 MDR-TB lineage3 None
ERR13249497 MDR-TB lineage3 None
SRR1163146 MDR-TB lineage3 None
SRR20969677 HR-TB lineage2.1 None
ERR13249749 Other lineage3 None
SRR25827681 Other lineage3 None
ERR11050977 Sensitive lineage3 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR13283992 Sensitive lineage3 None
SRR1172931 Sensitive lineage3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5979442 MDR-TB lineage3 None
ERR13285146 MDR-TB lineage3 None
ERR4829937 Pre-XDR-TB lineage3 pk
SRR1144789 MDR-TB lineage3 None
SRR21690729 Sensitive lineage3 None
ERR13290318 MDR-TB lineage3 None
ERR4800407 Other lineage3 in
SAMN02414870 MDR-TB lineage3 se
SAMN02628488 Sensitive lineage3 ir
SAMN02599063 Sensitive lineage3 in
ERR11082002 Sensitive lineage3 None
SRR25827852 XDR-TB lineage3 None
SRR3105768 Pre-XDR-TB lineage3 None
ERR212001 HR-TB None
SRR1175032 Sensitive lineage3 None
ERR2516402 MDR-TB lineage3 nl
ERR4821072 Sensitive lineage3 gb
ERR13249498 MDR-TB lineage3 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR25827734 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR13289875 Sensitive lineage3 None
ERR3470676 Sensitive lineage3 None
SRR1173812 Sensitive lineage3 None
SRR21691082 Sensitive lineage3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11081823 MDR-TB lineage3 None
ERR13283986 Sensitive lineage3 None
ERR3275871 Sensitive lineage3 nl
ERR4819312 Sensitive lineage3 None
ERR2446348 Sensitive lineage3 nl
ERR4596929 MDR-TB lineage3;lineage4.2.2.2 None
ERR4811105 HR-TB None
ERR4810741 HR-TB None
ERR11043680 MDR-TB lineage3 None
ERR13284662 MDR-TB lineage3 None
ERR13284776 MDR-TB lineage3 None
SRR1146416 MDR-TB lineage3 None