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SRA data
Rv3601c
- c.232T>C
Drug resistance types
0 Sensitive
0 RR-TB
11 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
6
M.canetti;lineage4.9
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage2.1;lineage2.2;lineage6.3
1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
lineage4.9;lineage6.1.3
1
M.canetti;lineage2.1;lineage6.3
1
lineage2.2.1.2;lineage7
1
La3;M.canetti
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
20
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR266125
Other
La3;M.canetti
None
ERR3283021
HR-TB
lineage4.9
None
ERR3445504
Other
lineage4.9;lineage6.1.3
None
ERR3797028
HR-TB
M.canetti;lineage4.9
None
ERR3797047
MDR-TB
lineage4.9
None
ERR473332
Other
lineage4.9
None
ERR8976043
HR-TB
lineage2.1;lineage2.2;lineage6.3
None
SRR18549032
HR-TB
lineage2.2.1.2;lineage7
None
SRR20969708
HR-TB
lineage2.2
None
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