lineage | Count |
---|---|
lineage4 | 10 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage1.1.1 | 1 |
lineage4.9 | 6 |
31 | |
lineage2.2.1 | 3 |
La2 | 1 |
lineage2.2 | 1 |
lineage4.3.4 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1.1 | 2 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | ERR181824 | HR-TB | lineage4 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675456 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | SRR5341470 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | ERR323053 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR3797064 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283028 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR387051 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None |
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