TB-Profiler
Home
Upload
SRA data
Rv0529
- c.-194A>C
Drug resistance types
0 Sensitive
3 RR-TB
2 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
3
lineage4.9
3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage4.2.2
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9
1
M.canetti;lineage4.2
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
lineage2.2.1.1
1
Showing 1 to 10 of 16 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
20
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR403298
MDR-TB
M.canetti;lineage4.2
None
ERR4798406
MDR-TB
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
None
ERR4814536
MDR-TB
M.canetti;lineage2.1;lineage3
None
ERR502889
Other
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR5311079
Other
La1.6;La3;M.canetti;lineage4.2;lineage4.9
None
ERR5311103
RR-TB
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
None
Showing 1 to 10 of 20 entries
Previous
1
2
Next