lineage | Count |
---|---|
63 | |
lineage2.2 | 5 |
La2 | 1 |
lineage4.7 | 1 |
lineage5.2 | 2 |
lineage4.6.2.2 | 3 |
lineage4.9 | 8 |
lineage4 | 8 |
lineage6.1.1 | 2 |
lineage4.1.2.1 | 6 |
lineage4.1.3 | 2 |
lineage3 | 2 |
lineage3.1.2 | 1 |
lineage2.2.1 | 4 |
lineage4.6.1.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.2 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage4.8 | 1 |
lineage6.3.1 | 1 |
La3 | 1 |
lineage6 | 1 |
lineage4.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
lineage4.2;La1.7 | 1 |
La1.2 | 1 |
lineage4.3 | 1 |
lineage4.4.1.1 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 125 |
ID | Drug resistance | Lineage | Country iso2 | ERR323039 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7535086 | Other | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR8217918 | HR-TB | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR323053 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067699 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR5336148 | Other | None | ERR3283036 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797069 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR702404 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR702406 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR1174897 | HR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1169249 | Other | La3 | None | ERR9787165 | Other | lineage6 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14782405 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR3675221 | HR-TB | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR23961549 | Other | La1.2 | None | SRR3675465 | HR-TB | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675572 | Other | None | ERR4817037 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4816656 | HR-TB | None | SRR7496472 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | ERR4818929 | HR-TB | None | SRR5007188 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341333 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR6045526 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None |
---|