Rv0005 - c.930C>G
Drug resistance types
12 Sensitive
2 RR-TB
72 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2 | 1 |
| 50 | |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 10 |
| lineage4 | 14 |
| lineage2.2.1 | 3 |
| lineage4.9 | 10 |
| lineage4.4.1.1 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.3 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage3 | 2 |
| lineage4.1 | 1 |
| lineage2.2 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR069989 | HR-TB | lineage2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13837684 | Sensitive | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14801749 | Sensitive | None | SRR15506895 | MDR-TB | lineage1.1.3 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | ERR1035239 | HR-TB | None | SRR15506896 | MDR-TB | lineage1.1.3 | None | SRR21732085 | Other | lineage3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR1640750 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR234659 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341315 | Sensitive | None | ERR4821053 | Other | lineage3 | None | SRR6045503 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR736848 | HR-TB | None |
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