lineage | Count |
---|---|
lineage4 | 20 |
37 | |
lineage2.2 | 4 |
lineage4.4.1.1 | 6 |
lineage4.9 | 5 |
lineage4;lineage3.1 | 1 |
lineage2.2.1 | 5 |
La1.2 | 1 |
lineage5.2 | 2 |
La1.8.1 | 1 |
lineage3 | 1 |
lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR067712 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR3283025 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR2513013 | Other | lineage4.4.1.1 | gb | ERR3283055 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR702406 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR8975733 | Sensitive | lineage4.4.1.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119669 | HR-TB | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR26331627 | MDR-TB | lineage4.4.1.1 | None | SRR14782405 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212123 | Other | None | ERR2446566 | Other | lineage4.1 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341456 | Other | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR6045555 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2660539 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR3132262 | RR-TB | lineage4.4.1.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR8217918 | HR-TB | None | ERR502532 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None |
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