Rv0006 - c.1200G>C
Drug resistance types
12 Sensitive
2 RR-TB
30 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 7 |
| lineage4.9 | 34 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 5 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1.1.3.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage5.2 | 2 |
| lineage2.2 | 3 |
| lineage3 | 1 |
| La2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046210 | Other | lineage4.9 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR3132262 | RR-TB | lineage4.4.1.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR7070595 | Other | lineage4.4.1.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR8975733 | Sensitive | lineage4.4.1.1 | None | ERR161037 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR2513013 | Other | lineage4.4.1.1 | gb | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR26331627 | MDR-TB | lineage4.4.1.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
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