Rv1484 - c.-613A>G
Drug resistance types
5 Sensitive
2 RR-TB
134 HR-TB
14 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| 136 | |
| lineage3 | 4 |
| lineage4.9 | 10 |
| lineage2.2.1 | 8 |
| lineage4 | 8 |
| lineage4.1.2.1 | 8 |
| lineage2.2 | 4 |
| lineage1.1 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage3.1 | 4 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 4 |
| lineage4.1.3 | 2 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2 | 3 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.5 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 220 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | ERR1035138 | MDR-TB | None | ERR2693239 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045053 | Other | None | SRR6045327 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496509 | Other | None | ERR323043 | HR-TB | None | SRR7496517 | Other | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3283027 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4407463 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4627334 | HR-TB | La1.8.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797474 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR5336148 | Other | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358991 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787197 | Other | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987722 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1173400 | Other | None | SRR1174897 | HR-TB | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR12416824 | HR-TB | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675501 | HR-TB | None | ERR176643 | HR-TB | None | ERR4816999 | Other | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675545 | HR-TB | None | ERR212034 | HR-TB | None | ERR212033 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2229201 | Sensitive | lineage4.8 | dk | ERR2229143 | Other | lineage4.1.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None |
|---|
