lineage | Count |
---|---|
100 | |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1.3 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage3 | 1 |
lineage4 | 5 |
lineage4.1.2.1 | 5 |
lineage2.2 | 1 |
lineage3.1 | 2 |
La2 | 1 |
lineage4.3.4.2.1 | 1 |
La1.8.1 | 3 |
lineage4.9 | 5 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage4.3.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
La3 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 1 |
lineage2 | 2 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 141 |
ID | Drug resistance | Lineage | Country iso2 | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675221 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR5341418 | Other | None | ERR4818929 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | ERR323036 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR294248 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR067681 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR1063858 | HR-TB | None | ERR133986 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR4798262 | HR-TB | La1 | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR987722 | HR-TB | None | ERR9117709 | HR-TB | None | ERR8976043 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1169194 | Other | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None |
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