Rv0006 - c.-101G>A
Drug resistance types
5 Sensitive
0 RR-TB
24 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.4.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4 | 1 |
| lineage4.8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR181824 | HR-TB | lineage4.9 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| SRR21657218 | Sensitive | lineage4.4.2 | None |
| ERR4188247 | HR-TB | lineage4.9 | None |
| ERR6358979 | Other | lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| ERR323107 | Sensitive | lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| ERR4872119 | MDR-TB | lineage4.6.2.2 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| SRR6046485 | Other | lineage4.9 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| ERR1063858 | HR-TB | lineage4.9 | None |
| ERR2514327 | HR-TB | lineage4.8 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR323115 | Sensitive | lineage4.9 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| ERR1063862 | HR-TB | lineage4.9 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| SRR6046594 | Sensitive | lineage4.9 | None |
| ERR1063849 | HR-TB | lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| SRR6045555 | Other | lineage4.9 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| SRR29050859 | Other | lineage4.9 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR9119525 | MDR-TB | lineage4.6.2.2 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR6079962 | HR-TB | lineage2.2.1.1 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR9786843 | Other | None | |
| ERR987722 | MDR-TB | None |
