TB-Profiler
Home
Upload
SRA data
Rv0005
- c.1980C>T
Drug resistance types
5 Sensitive
0 RR-TB
4 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
6
lineage4.4.2
3
lineage2.1;lineage4.1.4;lineage4.9
1
lineage3
1
Showing 1 to 4 of 4 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
11
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4811626
Sensitive
lineage4.4.2
cn
SRR25628594
Sensitive
lineage4.4.2
None
SRR25628605
Sensitive
lineage4.4.2
None
SRR28045139
Sensitive
lineage3
None
SRR6045219
HR-TB
lineage4.9
None
SRR6045555
Other
lineage4.9
None
SRR6046133
HR-TB
lineage4.9
None
SRR6046485
Other
lineage4.9
None
SRR6046594
Sensitive
lineage4.9
None
Showing 1 to 10 of 11 entries
Previous
1
2
Next