lineage | Count |
---|---|
92 | |
lineage4.9 | 7 |
lineage4 | 6 |
lineage2.2.1 | 5 |
lineage2.2 | 5 |
La1.2 | 1 |
lineage3 | 2 |
lineage4.3.2 | 2 |
lineage1.1.2 | 1 |
lineage3.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.5 | 1 |
lineage2 | 1 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 132 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341330 | HR-TB | None | SRR5341418 | Other | None | SRR5341302 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046397 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | ERR294266 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323043 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283036 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797069 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4769450 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR736867 | HR-TB | None | ERR736839 | Other | None | ERR9117709 | HR-TB | None | SRR24223037 | Sensitive | lineage4.3.2 | None | SRR24223038 | Sensitive | lineage4.3.2 | None | ERR736874 | HR-TB | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | ERR9786671 | Other | None | SRR1169194 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1184294 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR12882457 | Sensitive | lineage1.1.2 | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR12142341 | HR-TB | None | ERR11050589 | Sensitive | lineage4.1.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR26159043 | Other | lineage4.9 | None | SRR25395631 | Sensitive | lineage4.1.2.1 | None | SRR25827682 | Other | None | SRR8692807 | Other | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR1950012 | Sensitive | lineage4.8 | None | SRR3675502 | Other | None | SRR3675574 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR234659 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None |
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