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SRA data
Rv1173
- c.2244T>C
Drug resistance types
1 Sensitive
1 RR-TB
6 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
3
lineage4.9;lineage7
3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage2.1;lineage4.9;lineage7
1
lineage2.1;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
lineage4.1;lineage4.8
1
lineage2.2.1
1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR3283021
HR-TB
lineage4.9
None
ERR387051
Other
lineage4.9
None
ERR4798262
HR-TB
La1.2.BCG
None
ERR736835
HR-TB
La1.7;M.canetti;lineage4.9
None
ERR9786525
Other
lineage4.1;lineage4.8
None
SRR3675231
MDR-TB
lineage4.9;lineage7
None
SRR3675456
RR-TB
lineage4.9;lineage7
None
SRR3675495
Other
lineage2.1;lineage4.9
None
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