Rv3596c - c.2466T>A
Drug resistance types
2 Sensitive
1 RR-TB
14 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage1.2.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;lineage4.3.4 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 4 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| 1 | |
| La3;lineage4.9 | 3 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| La1.2.BCG | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.1.1.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR176751 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9786843 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR387051 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
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