Rv3596c - c.-7G>A


Drug resistance types
23 Sensitive 3 RR-TB 70 HR-TB 29 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 40 Other
lineage Counts
lineage Count
lineage4.9 50
lineage4.9;lineage7 3
La3;M.canetti;lineage2.1;lineage4.9 10
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9 9
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.1;lineage4.9;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
lineage4.1.2.1 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.2 1
lineage4.9;lineage9 2
La1;lineage2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.4.1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
4
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.9;lineage6.3 3
La3;lineage4.9 3
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage2.2.1 1
La2;lineage4.9 1
lineage4.1.1.3 1
lineage1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 2
La3 2
lineage4.4.1.2 1
La3;lineage2.1;lineage4.9 2
lineage2.2.1.1 2
M.canetti;lineage2.1;lineage4.9 7
lineage2.1;lineage4.1.1.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage1.1.2;lineage4 1
La3;lineage4.3.4 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.4.2.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 1
La1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 168
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176778 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR137286 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR926158 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR5341461 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR108471 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR5341308 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR5341299 HR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR1172817 Other La3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1034634 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1184294 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
ERR926156 Sensitive lineage4.9 None
SRR1640750 Other None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR387051 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1162740 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502510 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None