Rv2428 - c.66C>T


Drug resistance types
4 Sensitive 4 RR-TB 12 HR-TB 12 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 41 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
8
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 9
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.1 3
lineage4.9;lineage7 2
lineage4.4.2 1
lineage4.1.2.1 1
La3 2
lineage2.2.1 4
lineage2.1;lineage4.9;lineage6.3 6
lineage4.9;lineage6.3 2
lineage2.1;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.9 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2.2.1 1
lineage1.1.2 2
lineage4.3.4.2.1 1
lineage2.2 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 75
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR7535086 Other None
SRR3675236 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4819932 Other lineage4.7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR702406 Other lineage2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2179752 Sensitive lineage4.4.2 cn
ERR4820854 Other lineage4.1.2.1 None
SRR1172728 RR-TB La3 None
ERR4814352 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR387051 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046382 RR-TB lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6458423 HR-TB lineage2.2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675572 Other None
SRR1184381 MDR-TB None
ERR234659 HR-TB None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR2100037 Sensitive lineage1.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR11050716 Sensitive lineage1.1.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6045873 Sensitive lineage3 gb
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None