Rv2752c - c.1137T>C
Drug resistance types
33 Sensitive
3 RR-TB
45 HR-TB
21 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
85 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 53 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.9 | 10 |
| lineage4.9;lineage7 | 3 |
| 16 | |
| lineage2.2.1;lineage3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 24 |
| lineage4 | 2 |
| lineage4.4.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| La3;lineage2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.1.1 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.3 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La3;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 192 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8649115 | Sensitive | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR6866729 | Sensitive | lineage2.2.1 | None | ERR13260604 | Sensitive | lineage2.2.1 | None | ERR4815604 | Other | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4816999 | Other | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4813315 | MDR-TB | lineage2.2.1 | None | ERR4457768 | Sensitive | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4813350 | MDR-TB | lineage2.2.1 | pe | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR12117927 | MDR-TB | lineage2.2.1 | None | ERR9117709 | Other | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1184294 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4457767 | Sensitive | lineage2.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3287623 | MDR-TB | lineage2.2.1 | pe | ERR4812089 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28393768 | MDR-TB | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR1184372 | MDR-TB | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4812417 | Sensitive | lineage2.2.1 | pe | SRR3675572 | Other | None | ERR13260630 | MDR-TB | lineage2.2.1 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR30182366 | Sensitive | lineage2.2.1 | None | SRR29096541 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR16915735 | Sensitive | lineage2.2.1 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR2516546 | Pre-XDR-TB | lineage2.2.1 | pe | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR3287750 | MDR-TB | lineage2.2.1 | pe | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2184264 | Other | lineage2.2.1 | pe | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR13260284 | Sensitive | lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | ERR4457771 | Sensitive | lineage2.2.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4812676 | Sensitive | lineage2.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4813157 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR6866614 | Sensitive | lineage2.2.1 | None | ERR4457773 | Sensitive | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4829033 | Sensitive | lineage2.2.1 | it | ERR4457772 | Other | lineage2.2.1 | None | ERR751360 | MDR-TB | lineage2.2.1 | pe | SRR18289175 | Sensitive | lineage2.2.1 | None | SRR28393409 | HR-TB | lineage2.2.1;lineage4.3.4.1 | None | SRR25827682 | Other | None | ERR234659 | Other | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3287357 | Other | lineage2.2.1 | pe | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4819241 | Other | lineage4.9 | None | SRR10808379 | Other | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | SRR16915736 | Sensitive | lineage2.2.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4457766 | HR-TB | lineage2.2.1 | None | ERR4457770 | Sensitive | lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4024925 | Sensitive | lineage2.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4812074 | Sensitive | lineage2.2.1 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | ERR4178218 | Sensitive | lineage2.2.1 | None | ERR13260281 | MDR-TB | lineage2.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR6865484 | Sensitive | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR13260357 | MDR-TB | lineage2.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR28394186 | MDR-TB | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR6866712 | Sensitive | lineage2.2.1;lineage4 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR19276613 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR28393975 | MDR-TB | lineage2.2.1 | None | ERR9787197 | Other | None | SRR28393839 | HR-TB | lineage2.2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4457765 | Sensitive | lineage2.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4812937 | Sensitive | lineage2.2.1 | pe | SRR1196768 | MDR-TB | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4457769 | Sensitive | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR387051 | Other | lineage4.9 | None |
|---|
