Rv1854c - c.168C>T
Drug resistance types
18 Sensitive
2 RR-TB
18 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| 14 | |
| lineage4.8 | 15 |
| lineage4.3.3 | 1 |
| lineage4 | 6 |
| lineage4.9 | 2 |
| lineage2.2.1 | 5 |
| lineage3.1.1 | 1 |
| lineage3 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| La1 | 1 |
| lineage2.2.1.1 | 1 |
| La1.2 | 1 |
| lineage1 | 1 |
| lineage4.5;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675555 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR2229723 | HR-TB | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229154 | Sensitive | lineage4.8 | None | SRR3732650 | MDR-TB | lineage4.3.3 | None | ERR2229169 | HR-TB | lineage4.8 | None | ERR2229764 | HR-TB | lineage4.8 | None | ERR2229159 | Sensitive | lineage4.8 | None | ERR2229175 | Other | lineage4.8 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2229361 | HR-TB | lineage4.8 | None | ERR2229315 | Sensitive | lineage4 | None | ERR2229403 | Sensitive | lineage4.8 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2229486 | Other | lineage4.8 | None | ERR4817601 | Sensitive | lineage2.2.1 | None | SRR5341418 | Other | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229487 | Sensitive | lineage4.8 | None | ERR2245357 | Sensitive | lineage3.1.1 | None | SRR4035559 | RR-TB | lineage3 | None | SRR5341470 | HR-TB | None | ERR2179858 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820624 | Other | lineage4.8 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046659 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484836 | Sensitive | lineage2.2.1 | None | SRR6257063 | HR-TB | lineage4.2.1.1 | None | ERR502889 | Other | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR2513298 | Sensitive | lineage4.8 | gb | ERR11465203 | MDR-TB | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR387051 | HR-TB | None | ERR400496 | Sensitive | lineage1.2.1.2.1 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR7902600 | Sensitive | lineage1.2.1.2.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR1002697 | HR-TB | lineage4.2.1.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13986567 | Other | La1.2 | None | SRR11972163 | Sensitive | lineage1 | None | SRR3675455 | Sensitive | lineage4 | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR22249944 | Sensitive | lineage4.5;lineage4.1.2.1 | None |
|---|
