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SRA data
Rv1854c
- c.168C>T
Drug resistance types
8 Sensitive
0 RR-TB
3 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
La1.7;lineage4.9
3
lineage4.8
2
lineage4.2.1.1
2
lineage1.2.1.2.1
2
lineage4.9
1
La1.7;M.canetti;lineage4.9
1
lineage4.9;lineage7
1
La1.2.BCG
1
lineage2.1;lineage4.9;lineage7
1
lineage4.1.2.1;lineage4.5
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465203
MDR-TB
lineage4.3.4.2.1
None
ERR2513298
Sensitive
lineage4.8
gb
ERR387051
Other
lineage4.9
None
ERR400496
Sensitive
lineage1.2.1.2.1
None
ERR4798262
HR-TB
La1.2.BCG
None
ERR7902600
Sensitive
lineage1.2.1.2.1
None
SRR1002697
Sensitive
lineage4.2.1.1
None
SRR1175507
Sensitive
lineage4.1.1.3;lineage4.9
None
SRR22249944
Sensitive
lineage4.1.2.1;lineage4.5
None
SRR3675267
Other
La1.7;lineage4.9
None
Showing 1 to 10 of 18 entries
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