lineage | Count |
---|---|
lineage4.8 | 1 |
lineage4.1.1.2 | 1 |
55 | |
lineage4 | 39 |
lineage4.9;lineage2.1 | 1 |
lineage3 | 1 |
lineage2.2.1 | 3 |
lineage4.9 | 5 |
lineage4.1 | 1 |
lineage4.1.2 | 1 |
lineage4;lineage3.1 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
lineage6.1.3 | 1 |
La1.8.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 114 |
ID | Drug resistance | Lineage | Country iso2 | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR1035162 | Other | None | SRR5341387 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341456 | Other | None | SRR5341418 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341299 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR502889 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323085 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR3797046 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797474 | Other | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR14801749 | Sensitive | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR8692887 | Other | None | SRR1791747 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675550 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None |
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