Rv1854c - c.195G>A
Drug resistance types
5 Sensitive
0 RR-TB
15 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| lineage4.9 | 10 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR363500 | Sensitive | lineage4.9 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| ERR387051 | Other | lineage4.9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR363498 | Sensitive | lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
| ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| SRR5535933 | Other | lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
| ERR363449 | Sensitive | lineage4.9 | None |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR369162 | Other | lineage4.9 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR133825 | HR-TB | La1;lineage4.9 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| ERR373947 | Other | lineage4.9 | None |
