Rv0006 - c.174A>C
Drug resistance types
7 Sensitive
4 RR-TB
76 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| 57 | |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.9 | 18 |
| lineage4 | 7 |
| lineage2.2.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2.1 | 5 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.6.1.1 | 2 |
| La1 | 1 |
| La1.8.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 115 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675510 | Other | None | SRR3675222 | Other | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341456 | Other | None | SRR6045450 | Other | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2693227 | Other | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3797015 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283017 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR4769521 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787030 | Sensitive | lineage6 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861241 | HR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None |
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